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Xiao, Dongsheng, Matthieu P. Vanni, Catalin C. Mitelut, Allen W. Chan, Jeffrey M. LeDue, Yicheng Xie, Andrew Cn Chen, Nicholas V. Swindale, and Timothy H. Murphy. "Mapping cortical mesoscopic networks of single spiking cortical or sub-cortical neurons." Elife 6 (2017).
Connor, Steven A., Ina Ammendrup-Johnsen, Allen W. Chan, Yasushi Kishimoto, Chiaki Murayama, Naokazu Kurihara, Atsushi Tada, Yuan Ge, Hong Lu, Ryan Yan et al. "Altered Cortical Dynamics and Cognitive Function upon Haploinsufficiency of the Autism-Linked Excitatory Synaptic Suppressor MDGA2." Neuron 91, no. 5 (2016): 1052-68.
Murphy, Timothy H., Jamie D. Boyd, Federico Bolaños, Matthieu P. Vanni, Gergely Silasi, Dirk Haupt, and Jeff M. LeDue. "High-throughput automated home-cage mesoscopic functional imaging of mouse cortex." Nat Commun 7 (2016): 11611.
Silasi, Gergely, Dongsheng Xiao, Matthieu P. Vanni, Andrew C. N. Chen, and Timothy H. Murphy. "Intact skull chronic windows for mesoscopic wide-field imaging in awake mice." J Neurosci Methods 267 (2016): 141-9.
Hefendehl, J K., J LeDue, R W Y Ko, J Mahler, Timothy H. Murphy, and B A. MacVicar. "Mapping synaptic glutamate transporter dysfunction in vivo to regions surrounding Aβ plaques by iGluSnFR two-photon imaging." Nat Commun 7 (2016): 13441.
Parsons, Matthew P., Matthieu P. Vanni, Cameron L. Woodard, Rujun Kang, Timothy H. Murphy, and Lynn A. Raymond. "Real-time imaging of glutamate clearance reveals normal striatal uptake in Huntington disease mouse models." Nat Commun 7 (2016): 11251.
Hilton, Brett J., Eitan Anenberg, Thomas C. Harrison, Jamie D. Boyd, Timothy H. Murphy, and Wolfram Tetzlaff. "Re-Establishment of Cortical Motor Output Maps and Spontaneous Functional Recovery via Spared Dorsolaterally Projecting Corticospinal Neurons after Dorsal Column Spinal Cord Injury in Adult Mice." J Neurosci 36, no. 14 (2016): 4080-92.
Xie, Yicheng, Allen W. Chan, Alexander McGirr, Songchao Xue, Dongsheng Xiao, Hongkui Zeng, and Timothy H. Murphy. "Resolution of High-Frequency Mesoscale Intracortical Maps Using the Genetically Encoded Glutamate Sensor iGluSnFR." J Neurosci 36, no. 4 (2016): 1261-72.
Lacroix, Alexandre, Xavier Toussay, Eitan Anenberg, Clotilde Lecrux, Nerea Ferreirós, Anastassios Karagiannis, Fabrice Plaisier, Patrick Chausson, Frédéric Jarlier, Sean A. Burgess et al. "COX-2-Derived Prostaglandin E2 Produced by Pyramidal Neurons Contributes to Neurovascular Coupling in the Rodent Cerebral Cortex." J Neurosci 35, no. 34 (2015): 11791-810.
Chan, Allen W., Majid H. Mohajerani, Jeffrey M. LeDue, Yu Tian Wang, and Timothy H. Murphy. "Mesoscale infraslow spontaneous membrane potential fluctuations recapitulate high-frequency activity cortical motifs." Nat Commun 6 (2015): 7738.
Silasi, Gergely, Jennifer She, Jamie D. Boyd, Songchao Xue, and Timothy H. Murphy. "A mouse model of small-vessel disease that produces brain-wide-identified microocclusions and regionally selective neuronal injury." J Cereb Blood Flow Metab 35, no. 5 (2015): 734-8.
Funayama, Kenta, Genki Minamisawa, Nobuyoshi Matsumoto, Hiroshi Ban, Allen W. Chan, Norio Matsuki, Timothy H. Murphy, and Yuji Ikegaya. "Neocortical Rebound Depolarization Enhances Visual Perception." PLoS Biol 13, no. 8 (2015): e1002231.
Lim, Diana H., Jeffrey M. LeDue, and Timothy H. Murphy. "Network analysis of mesoscale optical recordings to assess regional, functional connectivity." Neurophotonics 2, no. 4 (2015): 041405.
Anenberg, Eitan, Allen W. Chan, Yicheng Xie, Jeffrey M. LeDue, and Timothy H. Murphy. "Optogenetic stimulation of GABA neurons can decrease local neuronal activity while increasing cortical blood flow." J Cereb Blood Flow Metab 35, no. 10 (2015): 1579-86.
Zeng, Shaoqun, and Timothy H. Murphy. "Special Section Guest Editorial:Special Section on Light Microscopy of Connectivity." Neurophotonics 2, no. 4 (2015): 041401.
Murphy, Timothy H. "Two-Photon Imaging of Neuronal Structural Plasticity in Mice during and after Ischemia." Cold Spring Harb Protoc 2015, no. 6 (2015): 548-57.
Vanni, Matthieu P., and Timothy H. Murphy. "Mesoscale transcranial spontaneous activity mapping in GCaMP3 transgenic mice reveals extensive reciprocal connections between areas of somatomotor cortex." J Neurosci 34, no. 48 (2014): 15931-46.
Anenberg, Eitan, Pamela Arstikaitis, Yoichi Niitsu, Thomas C. Harrison, Jamie D. Boyd, Brett J. Hilton, Wolfram Tetzlaff, and Timothy H. Murphy. "Ministrokes in channelrhodopsin-2 transgenic mice reveal widespread deficits in motor output despite maintenance of cortical neuronal excitability." J Neurosci 34, no. 4 (2014): 1094-104.
Harrison, Thomas C., and Timothy H. Murphy. "Motor maps and the cortical control of movement." Curr Opin Neurobiol 24, no. 1 (2014): 88-94.
Lim, Diana H., Jeffrey M. LeDue, Majid H. Mohajerani, and Timothy H. Murphy. "Optogenetic mapping after stroke reveals network-wide scaling of functional connections and heterogeneous recovery of the peri-infarct." J Neurosci 34, no. 49 (2014): 16455-66.
Xie, Yicheng, Shangbin Chen, Yujin Wu, and Timothy H. Murphy. "Prolonged deficits in parvalbumin neuron stimulation-evoked network activity despite recovery of dendritic structure and excitability in the somatosensory cortex following global ischemia in mice." J Neurosci 34, no. 45 (2014): 14890-900.
Silasi, Gergely, and Timothy H. Murphy. "Removing the brakes on post-stroke plasticity drives recovery from the intact hemisphere and spinal cord." Brain 137, no. Pt 3 (2014): 648-50.
Silasi, Gergely, and Timothy H. Murphy. "Stroke and the connectome: how connectivity guides therapeutic intervention." Neuron 83, no. 6 (2014): 1354-68.
Silasi, Gergely, and Timothy H. Murphy. "Stroke and the connectome: how connectivity guides therapeutic intervention." Neuron 84, no. 2 (2014): 511.
Harrison, Thomas C., Gergely Silasi, Jamie D. Boyd, and Timothy H. Murphy. "Displacement of sensory maps and disorganization of motor cortex after targeted stroke in mice." Stroke 44, no. 8 (2013): 2300-6.